MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Staphylococcus arlettae
19428wH1_IOV5
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
NCBI Genome Annotation:
contigs: 80
bases: 2,607,375 bps
CDS: 2,536
rRNA: 17
tRNA: 63
tmRNA: 1
Total number of protein coding genes annotated/found:
2,473
Display
20
50
100
All items per page
Items 1 - 20
🡆
click arrow to navigate by page or
of 124 pages
Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA)
Range ^
Gene Product Name
SEQF5016|JADGMC010000005.1
MBF0737348.1
Genome Viewer
NA
AA
4977/1659
37424-42400
amino acid adenylation domain-containing protein
SEQF5016|JADGMC010000005.1
MBF0737455.1
Genome Viewer
NA
AA
4497/1499
141310-145806
glutamate synthase large subunit
SEQF5016|JADGMC010000002.1
MBF0736946.1
Genome Viewer
NA
AA
4317/1439
154701-159017
PolC-type DNA polymerase III
SEQF5016|JADGMC010000027.1
MBF0738858.1
Genome Viewer
NA
AA
3888/1296
12138-16025
glucosaminidase domain-containing protein
SEQF5016|JADGMC010000004.1
MBF0737253.1
Genome Viewer
NA
AA
3654/1218
82768-86421
helicase-exonuclease AddAB subunit AddA
SEQF5016|JADGMC010000001.1
MBF0736769.1
Genome Viewer
NA
AA
3591/1197
236534-232944
DNA-directed RNA polymerase subunit beta'
SEQF5016|JADGMC010000002.1
MBF0736917.1
Genome Viewer
NA
AA
3570/1190
118481-122050
chromosome segregation protein SMC
SEQF5016|JADGMC010000015.1
MBF0738386.1
Genome Viewer
NA
AA
3555/1185
23127-19573
DNA translocase FtsK
SEQF5016|JADGMC010000001.1
MBF0736770.1
Genome Viewer
NA
AA
3552/1184
240273-236722
DNA-directed RNA polymerase subunit beta
SEQF5016|JADGMC010000020.1
MBF0738677.1
Genome Viewer
NA
AA
3513/1171
19643-23155
transcription-repair coupling factor
SEQF5016|JADGMC010000004.1
MBF0737252.1
Genome Viewer
NA
AA
3486/1162
79302-82787
helicase-exonuclease AddAB subunit AddB
SEQF5016|JADGMC010000019.1
MBF0738604.1
Genome Viewer
NA
AA
3456/1152
3655-200
pyruvate carboxylase
SEQF5016|JADGMC010000006.1
MBF0737531.1
Genome Viewer
NA
AA
3447/1149
68918-65472
dynamin family protein
SEQF5016|JADGMC010000013.1
MBF0738269.1
Genome Viewer
NA
AA
3192/1064
25700-28891
DNA polymerase III subunit alpha
SEQF5016|JADGMC010000002.1
MBF0736884.1
Genome Viewer
NA
AA
3174/1058
81336-84509
carbamoyl-phosphate synthase large subunit
SEQF5016|JADGMC010000018.1
MBF0738575.1
Genome Viewer
NA
AA
3030/1010
28748-25719
SMC family ATPase
SEQF5016|JADGMC010000003.1
MBF0737097.1
Genome Viewer
NA
AA
2997/999
136775-133779
beta-galactosidase
SEQF5016|JADGMC010000011.1
MBF0738068.1
Genome Viewer
NA
AA
2955/985
15527-18481
formate dehydrogenase subunit alpha
SEQF5016|JADGMC010000021.1
MBF0738715.1
Genome Viewer
NA
AA
2934/978
29371-26438
AAA family ATPase
SEQF5016|JADGMC010000012.1
MBF0738192.1
Genome Viewer
NA
AA
2844/948
26909-29752
excinuclease ABC subunit UvrA
Items 1 - 20
🡆
click arrow to navigate by page or
of 124 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI,UID,Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by